Publications

You can also find my articles on my Google Scholar profile.

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2019

Journal Articles

1. Behra, P. R. K., Pettersson, B. M. F., Das, S., Dasgupta, S., & Kirsebom, L. (2019). Comparative genomics of Mycobacterium mucogenicum and Mycobacterium neoaurum clade members emphasizing tRNA and non-coding RNA. Accepted BMC Evolutionary Biology.
2. Das, S., Pettersson, B. M. F., Behra, P. R. K., Jacobsson, K.-G., Dasgupta, S., Ennis, D. G., & Kirsebom, L. (2019). Extended insight into the Mycobacterium chelonae-abscessus complex through whole genome sequencing of Mycobacterium salmoniphilium outbreak and Mycobacterium salmoniphilium-like strains. Accepted in Scientific Reports.
3. "Das, S., Frisk, C., Eriksson, M. J., Walentinsson, A., Corbascio, M., Hage, C., Kumar, C., Asp, M., Lundeberg, J., Maret, E., Persson, H., Linde, C., & Persson, B. (2019). Transcriptomics of cardiac biopsies reveals differences in patients with or without diagnostic parameters for heart failure with preserved ejection fraction. Scientific Reports, 9(1), 3179." [Pdf]

2018

Journal Articles

1. "Das, S., Pettersson, F., Behra, P. R. K., Mallick, A., Cheramie, M., Shirreff, L., Tanner DuCote, T., Dasgupta, S., Ennis, D. G., & Kirsebom, L. (2018). Extensive genomic diversity among Mycobacterium marinum strains revealed by whole genome sequencing. Scientific Reports, 8(1), 315." [Pdf]

2016

Journal Articles

1. "Das, S., Pettersson, B. M. F., Behra, P. R. K., Ramesh, M., Dasgupta, S., Bhattacharya, A., & Kirsebom, L. A. (2016). The Mycobacterium phlei genome: expectations and surprises. Genome Biology and Evolution, 8(4), 975–985." [Pdf]

2015

Journal Articles

1. "Das, S., Pettersson, B. M. F., Behra, P. R. K., Ramesh, M., Dasgupta, S., Bhattacharya, A., & Kirsebom, L. a. (2015). Characterization of Three Mycobacterium spp. with Potential Use in Bioremediation by Genome Sequencing and Comparative Genomics. Genome Biology and Evolution, 7(7), 1871–1886." [Pdf]
2. "Pettersson, B. M. F., Das, S., Behra, P. R. K., Jordan, H. R., Ramesh, M., Mallick, A., Root, K. M., Cheramie, M. N., de la Cruz Melara, I., Small, P. L. C., Dasgupta, S., Ennis, D. G., & Kirsebom, L. A. (2015). Comparative Sigma Factor-mRNA Levels in Mycobacterium marinum under Stress Conditions and during Host Infection. PloS One, 10(10), e0139823." [Pdf]

2014

Journal Articles

1. "Pettersson, B. M. F., Behra, P. R. K., Manduva, S., Das, S., Dasgupta, S., Bhattacharya, A., & Kirsebom, L. A. (2014). Draft Genome Sequence of Saccharopolyspora rectivirgula. Genome Announcements, 2(1)." [Pdf]

2013

Journal Articles

1. "Das, S., Roychowdhury, T., Kumar, P., Kumar, A., Kalra, P., Singh, J., Singh, S., Prasad, H., & Bhattacharya, A. (2013). Genetic heterogeneity revealed by sequence analysis of Mycobacterium tuberculosis isolates from extra-pulmonary tuberculosis patients. BMC Genomics, 14(1), 404." [Pdf]
2. "Fredrik Pettersson, B. M., Nitharwal, R. G., Das, S., Krishna Behra, P. R., Benedik, E., Arasu, U. T., Islam, N. M., Dasgupta, S., Bhattacharya, A., & Kirsebom, L. a. (2013). Identification and expression of stressosomal proteins in Mycobacterium marinum under various growth and stress conditions. FEMS Microbiology Letters." [Pdf]

2012

Theses

1. Sarbashis, D. (2012). Comparative Analysis and Study of Mutations in Bacterial Genomes [PhD Thesis].

Journal Articles

1. "Das, S., Duggal, P., Roy, R., Myneedu, V. P., Behera, D., Prasad, H. K., & Bhattacharya, A. (2012). Identification of Hot and Cold spots in genome of Mycobacterium tuberculosis using Shewhart Control Charts. Scientific Reports, 2, 297." [Pdf]
2. "Hon, C.-C., Weber, C., Sismeiro, O., Proux, C., Koutero, M., Deloger, M., Das, S., Agrahari, M., Dillies, M.-A., Jagla, B., Coppee, J.-Y., Bhattacharya, A., & Guillen, N. (2012). Quantification of stochastic noise of splicing and polyadenylation in Entamoeba histolytica. Nucleic Acids Research." [Pdf]

2009

Journal Articles

1. "Das, S., Yennamalli, R. M., Vishnoi, A., Gupta, P., & Bhattacharya, A. (2009). Single-nucleotide variations associated with Mycobacterium tuberculosis KwaZulu-Natal strains. Journal of Biosciences, 34(3), 397–404." [Pdf]
2. "Das, S., Vishnoi, A., & Bhattacharya, A. (2009). ABWGAT: anchor-based whole genome analysis tool. Bioinformatics (Oxford, England), 25(24), 3319–3320." [Pdf]

2008

Theses

1. Das, S. (2008). Identification of single nucleotide polymorphisms and inversions in genomic sequences [M.Tech Thesis]. Jawaharlal Nehru University, India.